PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C010788P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 151aa    MW: 17434.8 Da    PI: 8.0861
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C010788P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23.1e-1267115553
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                     ++ rr+++NRe+ArrsR RKk  +e L+++v  L  +N++Lk++l ++ 
  MELO3C010788P1  67 RKLRRMISNRESARRSRWRKKRHLEDLTNEVNRLMMQNRELKDRLGRIL 115
                     6789***************************************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-1060113No hitNo description
SMARTSM003381.4E-1063127IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.40465114IPR004827Basic-leucine zipper domain
PfamPF001706.7E-1066114IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-1167120No hitNo description
CDDcd147024.44E-1568115No hitNo description
PROSITE patternPS0003607085IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MAMLNMGEDG VGFQCEVPDQ NNHEFTATEI EELLSLFLAN DGPPSPGSDS QGSLRTSATC  60
STNENERKLR RMISNRESAR RSRWRKKRHL EDLTNEVNRL MMQNRELKDR LGRILNSRHM  120
VMRENDWLWM ESVGLRARLS DLCRILAVMQ *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818230.0LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132570.0LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008444526.11e-106PREDICTED: basic leucine zipper 8
TrEMBLA0A1S3BAH51e-105A0A1S3BAH5_CUCME; basic leucine zipper 8
STRINGXP_008444526.11e-106(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59530.18e-17basic leucine-zipper 4