PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C012485P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 70aa    MW: 7952.8 Da    PI: 10.8688
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C012485P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.66.5e-094468327
                    XXCHHHCHHHHHHHHHHHHHHHHHH CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkae 27
                    + k  rr+++NReAAr+sR+RKka+
  MELO3C012485P2 44 DQKTLRRLAQNREAARKSRLRKKAS 68
                    5678899****************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-53567No hitNo description
PfamPF077161.6E-54267IPR004827Basic-leucine zipper domain
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MTDVSPRTDI STDVDTDDKH QRLDMLQRNA VASDSSDRTK DKSDQKTLRR LAQNREAARK  60
SRLRKKASH*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818965e-32LN681896.1 Cucumis melo genomic scaffold, anchoredscaffold00016.
GenBankLN7132645e-32LN713264.1 Cucumis melo genomic chromosome, chr_10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004142384.19e-38PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_008446973.11e-37PREDICTED: transcription factor TGA2-like
RefseqXP_008446976.11e-37PREDICTED: transcription factor TGA2-like
RefseqXP_011655926.19e-38PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011655927.19e-38PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ391404e-20TGA6_ARATH; Transcription factor TGA6
TrEMBLA0A0A0KV592e-36A0A0A0KV59_CUCSA; Uncharacterized protein
TrEMBLA0A1S3BGZ32e-36A0A1S3BGZ3_CUCME; transcription factor TGA2-like
STRINGXP_008446973.14e-37(Cucumis melo)
STRINGXP_004142384.13e-37(Cucumis sativus)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06960.22e-13OCS-element binding factor 5