PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C016121P2
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family BES1
Protein Properties Length: 326aa    MW: 34700.5 Da    PI: 8.362
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C016121P2genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.22.2e-6421451150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sa asp +s q
  MELO3C016121P2   2 TSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYTSHQ 96 
                     5899*****************************************************************************************88 PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                             +sp++s ++sp sssfpsp+s++ + + ++  +sl+p+l++ls++sss+
  MELO3C016121P2  97 --------PSPCASFNPSPGSSSFPSPASSSYVGNPNTdgSSLIPWLKNLSTSSSSA 145
                     ........*******************9999887766677**********9977764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.0E-653139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MTSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPIERM DVVGGSAAAS PYTSHQPSPC ASFNPSPGSS SFPSPASSSY  120
VGNPNTDGSS LIPWLKNLST SSSSASSSKL PNHYIHGGSI SAPVTPPLSS PTARTPRLKA  180
DWEDQSVLPG WSAQYYSSQP SSTPPSPGRQ IVPTPEWFAG LRIPQGGPNS PTFSLVSTNP  240
FGFKEAAITG GGSRMWTPGQ SGTCSPAIAA GSDHTADIPM SEVISDEFAF GSNAAGLVKP  300
WEGEIIHEEC GSDDLELTLG NSRTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-23677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818730.0LN681873.1 Cucumis melo genomic scaffold, anchoredscaffold00027.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008451746.10.0PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-137BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A1S3BRM10.0A0A1S3BRM1_CUCME; BES1/BZR1 homolog protein 4
STRINGXP_008451746.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-119BES1/BZR1 homolog 4