PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C016835P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 155aa    MW: 18360.9 Da    PI: 10.1297
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C016835P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.7e-1256113562
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     +r +r+++NRe+ArrsR+RKk  +e+L+   + L+ +N++Lk +l+   + ++ ++ +
  MELO3C016835P1  56 RRRKRMISNRESARRSRLRKKRHLENLAVQTDRLKMKNQELKRQLNLVVNRYYMVRRQ 113
                     799******************************************9988887766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-1352116IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-1053102No hitNo description
PROSITE profilePS5021710.65754117IPR004827Basic-leucine zipper domain
PfamPF001709.9E-1055114IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-1056108No hitNo description
CDDcd147029.01E-1557107No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MFYPEGEIVK FCRPIQEPGF TTAEIQELWS LLEDPARSNS GSQDSSQAVS LIDEERRRKR  60
MISNRESARR SRLRKKRHLE NLAVQTDRLK MKNQELKRQL NLVVNRYYMV RRQNEGLWSE  120
FVALHARLSD LYRISVPMQE KENSCMQISF NYFS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15776RKRMISNRESARRSRLRKKR
26874RRSRLRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818610.0LN681861.1 Cucumis melo genomic scaffold, anchoredscaffold00029.
GenBankLN7132610.0LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016901301.11e-111PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1S4DZ831e-109A0A1S4DZ83_CUCME; bZIP transcription factor 53-like
STRINGXP_008452673.11e-106(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.12e-18basic leucine-zipper 5