PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C020437P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bHLH
Protein Properties Length: 107aa    MW: 12532.8 Da    PI: 10.8785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C020437P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-051154737
                    HHHHHHHHHHHHHHHHHHCTSCCC................TTS- CS
             HLH  7 erErrRRdriNsafeeLrellPkas.............kapskK 37
                    erEr+RR++i   +  Lr llP  +             k++ kK
  MELO3C020437P1 11 ERERQRRQEISALYMPLRILLPLEFikvicgtvhrgrdKQREKK 54
                    8*********************9888888888887776444443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MDKDVVELGR ERERQRRQEI SALYMPLRIL LPLEFIKVIC GTVHRGRDKQ REKKRKKKDQ  60
ELTGDDIGLF VVGLHRYGSP LSRRKDIEMR RIGLRLGFSL CVICRL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14456RGRDKQREKKRKK
25256KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818451e-180LN681845.1 Cucumis melo genomic scaffold, anchoredscaffold00043.
GenBankLN7132591e-180LN713259.1 Cucumis melo genomic chromosome, chr_5.