PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MELO3C022945P1

Organism

Cucumis melo

Taxonomic ID

3656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis

Family

GeBP

Protein Properties

Length: 205aa MW: 24174.2 Da PI: 6.5393

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MELO3C022945P1	genome	MELONOMICS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	35.7	2.3e-11	26	118	7	97
DUF573 7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk........aksgkepsfskehdqkifelsk 93 ws+ e+ lL+ l++f++k+ ++fy f+++ ++vsk q+++Ki++LK + +++ + +k ++ + +++ ++ fels+ MELO3C022945P1 26 WSKGEELNLLKKLVEFNSKNI-----SREEFYPFLRNGSLAEVSKIQIFDKIQQLKSEYLENKLElrkmrkrnVKL-EDDDDYNDKRDEGFELSN 114 **************66554.....5799*************************98876643232222222.2223334444689* PP DUF573 94 kiWg 97 ++Wg MELO3C022945P1 115 QLWG 118 *8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.4E-9	26	118	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence Send to blast
MEEEKERRKS SLGSEKKKRR KSLFEWSKGE ELNLLKKLVE FNSKNISREE FYPFLRNGSL 60 AEVSKIQIFD KIQQLKSEYL ENKLELRKMR KRNVKLEDDD DYNDKRDEGF ELSNQLWGEV 120 DETERASNSK ALEVCSRNYY EGFFESCGLD VQLFDPSFHD ATKKDIDHLF NLEHHVILSK 180 AKLTAQILQL KYDLIQARVN NPTN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	20	RRKSSLGSEKKKRRK
2	15	19	KKKRR
3	15	20	KKKRRK
4	16	20	KKRRK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	LN681910	0.0	LN681910.1 Cucumis melo genomic scaffold, anchoredscaffold00056.
GenBank	LN713264	0.0	LN713264.1 Cucumis melo genomic chromosome, chr_10.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0A0KPQ5	4e-86	A0A0A0KPQ5_CUCSA; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF31057	2	2