PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C024087P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 210aa    MW: 24045.5 Da    PI: 8.9636
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C024087P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.51.6e-14125171248
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++l+r+rr++kNRe+A rsR+RK+a + eLe  +  Le+eN++L ke
  MELO3C024087P1 125 AALQRQRRMIKNRESAARSRERKQAHQIELESIASRLEEENERLLKE 171
                     789****************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.0E-11124192IPR004827Basic-leucine zipper domain
PfamPF001703.1E-12125171IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.53126171IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10128172No hitNo description
CDDcd147071.58E-16128175No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-12129173No hitNo description
PROSITE patternPS000360131146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MKKSNQIFRT ITPASAAAAK FDTINFHNSN VDSLVALIDN RNPLSHLDGE FHTSSPSSVS  60
KTVDDLWRQL KEESVEDLIL NPLSCLKDFD RVYVEDQENV GFGNKVDIRA RGKRRRVAME  120
PMDDAALQRQ RRMIKNRESA ARSRERKQAH QIELESIASR LEEENERLLK EKVLLVILLA  180
RPFTATKCQN VSWCKISVVH IAFFFYLLC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112116KRRRV
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6817960.0LN681796.1 Cucumis melo genomic scaffold, anchoredscaffold00065.
GenBankLN7132550.0LN713255.1 Cucumis melo genomic chromosome, chr_1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008461925.11e-122PREDICTED: G-box-binding factor 4-like isoform X1
SwissprotP427773e-24GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A1S3CFQ61e-121A0A1S3CFQ6_CUCME; G-box-binding factor 4-like isoform X1
STRINGXP_008461925.11e-121(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-22bZIP family protein