PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_10315.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family EIL
Protein Properties Length: 615aa    MW: 67962.3 Da    PI: 5.8309
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_10315.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3402.45.6e-123393591323
                   XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWke 97 
                   eel++rmwkd+++lkr+ke++++l   ++a++++++ +k ++ a rkkm+raQDgiLkYMlk mevcnaqGfvYgiip+kgkpv+gas+++raWWke
  MLOC_10315.3  39 EELTRRMWKDKVRLKRIKEKQQRLA-LEQAELEKSNPKKLSDLALRKKMARAQDGILKYMLKLMEVCNAQGFVYGIIPDKGKPVSGASENIRAWWKE 134
                   8*******************99866.555569***************************************************************** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-- CS
          EIN3  98 kvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtpp 194
                   kv+fd+ngpaai+ky+ +n +l +++s+   ++ ++ sl++lqD tlgSLLsalmqhc+p+qr++pl+kg++pPWWP+G+e+ww +lgl+k    pp
  MLOC_10315.3 135 KVKFDKNGPAAIAKYEVENSLLVNGQSS---GTINQYSLMDLQDGTLGSLLSALMQHCSPQQRKYPLDKGIPPPWWPSGNEEWWIALGLPKGKT-PP 227
                   **********************998888...88*********************************************************9987.** PP

                   ---GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX....XXXXXXXXXXXXXXXXXXXXX CS
          EIN3 195 ykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss....slrkqspkvtlsceqkedveg 286
                   ykkphdlkk wk++vLtavikhmsp++++ir ++r+sk+lqdkm+akes ++l vl++ee  ++++    s      l +++ +   sc+ ++dv+ 
  MLOC_10315.3 228 YKKPHDLKKFWKIGVLTAVIKHMSPHFDKIRYHVRKSKCLQDKMTAKESLIWLVVLQREEY-AHSIDNGvSDthhcDLGDKNGSSYSSCD-EYDVDC 322
                   *********************************************************9984.4445444322444444445555555665.9****9 PP

                   XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3 287 kkeskikhvqavkttagfpvvrkrkkkpsesakvssk 323
                    +e+ ++++++++     p+v+ r+++ s+s   + +
  MLOC_10315.3 323 MEEPPQSTISKDDVGVRQPAVHIREENASSSGNKKRH 359
                   9999999999999988666555555443333222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-12239287No hitNo description
Gene3DG3DSA:1.10.3180.105.9E-67162289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-58167289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 615 aa     Download sequence    Send to blast
MMDNLAIIAK ELGDVSDFEV DGIPNLSEND VSDEEIEAEE LTRRMWKDKV RLKRIKEKQQ  60
RLALEQAELE KSNPKKLSDL ALRKKMARAQ DGILKYMLKL MEVCNAQGFV YGIIPDKGKP  120
VSGASENIRA WWKEKVKFDK NGPAAIAKYE VENSLLVNGQ SSGTINQYSL MDLQDGTLGS  180
LLSALMQHCS PQQRKYPLDK GIPPPWWPSG NEEWWIALGL PKGKTPPYKK PHDLKKFWKI  240
GVLTAVIKHM SPHFDKIRYH VRKSKCLQDK MTAKESLIWL VVLQREEYAH SIDNGVSDTH  300
HCDLGDKNGS SYSSCDEYDV DCMEEPPQST ISKDDVGVRQ PAVHIREENA SSSGNKKRHD  360
KRSTQTLPST KETKKPLKRR KHIGQFSVDG SEVERTQRND NTPEVLSSAI PDMNSNQMEL  420
VCVADLLTSF NHVSTNGGAL QHQGDVQGNF VPPGVVVNNY SQAANIAPSS IYMADQPLAS  480
ASNDYANSWP GNTFQPNVGL GSIGFSSSSH DYQSSSAAKH SLPLSTDNHV PAMGTGGLNS  540
SYSHHMAGSG NSTSAAGDTQ QIMSDAFYID PDDKFIGSSF DGLPLDLIGI NSPIPDLDEL  600
GELLDDDDLM QYLGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-621672879129ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1374380KPLKRRK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_10315.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3710880.0AK371088.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2124J15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146451.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146452.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146453.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146454.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146456.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_020146457.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-138EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLF2E4L40.0F2E4L4_HORVV; Predicted protein
STRINGMLOC_10315.30.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-140ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]