PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_11494.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family VOZ
Protein Properties Length: 189aa    MW: 20860.9 Da    PI: 6.536
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_11494.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ108.86.1e-34173145217
           VOZ 145 mkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                   mk+fgglk+syymdpqpss++ewhl+eyein++++lalyrle+k +d+k+s+k+k+ ++sl+++q+++++l+a
  MLOC_11494.2   1 MKDFGGLKKSYYMDPQPSSTYEWHLFEYEINDSNTLALYRLEFKASDAKRSVKSKLGSSSLNEIQQQMVKLSA 73 
                   9**********************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MKDFGGLKKS YYMDPQPSST YEWHLFEYEI NDSNTLALYR LEFKASDAKR SVKSKLGSSS  60
LNEIQQQMVK LSANSPVDSK RGARSKTKAS QKDTTVNTYP ALKATNQAGA SNAYETVPLN  120
IPNQANASNA YQTVAPNIPN QDSTSNAYED SSQVDPMSFL NDNVVYGPHL PYGYPDGKGD  180
FYWNPTSGT
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_11494.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3762940.0AK376294.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3120B09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020158802.11e-121transcription factor VOZ1-like
TrEMBLA0A287GB911e-131A0A287GB91_HORVV; Uncharacterized protein
TrEMBLF2EJG71e-131F2EJG7_HORVV; Predicted protein
STRINGMLOC_11494.11e-133(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-26vascular plant one zinc finger protein