PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_13636.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 235aa    MW: 26215.2 Da    PI: 11.525
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_13636.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like811.4e-252378255
       G2-like  2 prlrWtpeLHerFveaveqLGGsekA..tPktilelmkvkgLtlehvkSHLQkYRl 55
                  pr+rWt eL + Fv+av++LG  + A  tPk+ilelm+v+gLt++hvkSHLQ+YR 
  MLOC_13636.1 23 PRMRWTAELESGFVRAVDRLGSRDSAkvTPKRILELMDVQGLTISHVKSHLQMYRC 78
                  8*******************99876555***************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.2E-251978IPR009057Homeodomain-like
SuperFamilySSF466893.94E-132278IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-202377IPR006447Myb domain, plants
PfamPF002491.9E-82477IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MAKKQEAWRR GGFVRRYTRS SVPRMRWTAE LESGFVRAVD RLGSRDSAKV TPKRILELMD  60
VQGLTISHVK SHLQMYRCTP HGNKGKQGGG GAKNPCAFLP EMQPQLGLKN HPFATDERGS  120
EGLTFPPMKR FFAPTRLRAK LLDFHVKKQA LITHFGRPFF SLSLFSGSRV DRSKAGAETA  180
ASCKSMQGNS DTRVMIPGNR RCIDDYLQQH AMSSVGRMRN VNEGLRRHSA AAAAA
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_13636.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A287UG851e-157A0A287UG85_HORVV; Uncharacterized protein
STRINGMLOC_13636.11e-175(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.13e-22G2-like family protein