PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_14243.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 160aa    MW: 17618.9 Da    PI: 9.6075
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_14243.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1568.3e-1888144359
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                   +++r+ r+++NRe+A rsR+RK+a++eeLe++v  L   N +Lkk+ +elk eva+l
  MLOC_14243.1  88 DDRRTVRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLKKQCKELKREVAAL 144
                   689**************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-1586150IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.02488144IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-1688144No hitNo description
PfamPF001702.4E-1489144IPR004827Basic-leucine zipper domain
CDDcd147073.88E-1990144No hitNo description
SuperFamilySSF579596.75E-1390144No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MANYRLGGGG NGHYEMAAAA WREPESPQLS LMSGCSSLFS ISGLRDDDTD LHLLAGARSL  60
PSTPVSFGGF AGGDEVDMEL PQGGSGGDDR RTVRMMRNRE SALRSRARKR AYVEELEKEV  120
RRLVDDNLKL KKQCKELKRE VAALVLPTKS SLRRTSSTQF
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_14243.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2490120.0AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177215.11e-100protein FD-like
TrEMBLM0UU571e-112M0UU57_HORVV; Uncharacterized protein
STRINGMLOC_14243.11e-113(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-12bZIP family protein