PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_14243.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 115aa    MW: 12365.8 Da    PI: 8.5239
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_14243.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.4e-0888112327
                   XXCHHHCHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkae 27 
                   +++r+ r+++NRe+A rsR+RK+ +
  MLOC_14243.2  88 DDRRTVRMMRNRESALRSRARKRVR 112
                   689*******************865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-587113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    Send to blast
MANYRLGGGG NGHYEMAAAA WREPESPQLS LMSGCSSLFS ISGLRDDDTD LHLLAGARSL  60
PSTPVSFGGF AGGDEVDMEL PQGGSGGDDR RTVRMMRNRE SALRSRARKR VRAHI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106112ARKRVRA
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_14243.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2490120.0AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020177215.17e-62protein FD-like
TrEMBLM0UU584e-77M0UU58_HORVV; Uncharacterized protein
STRINGMLOC_14243.11e-74(Hordeum vulgare)