 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_1442.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
GRAS |
| Protein Properties |
Length: 458aa MW: 49551.6 Da PI: 5.5453 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_1442.1 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 302.9 | 7.8e-93 | 65 | 455 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl..fsevsPilkfsh 95
++lL++cA+a++++d++l+q++L+ l+++a dgd++qRl+a f+ AL ar +r ++ + +a+++ +s ++++++a++l f++++P+++f++
MLOC_1442.1 65 EQLLVHCANAIEANDATLTQQILWVLNNIAPADGDSNQRLTAAFLCALVARASRtgACKAVTAAVAAAVESAALHVHRFTAVELasFVDLTPWHRFGY 162
79***************************************************943444555555444444444777777777789************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl.......v 182
++aN+aIleaveg vH++D++ ++++Q p+L++ LasR egpp lR+T+ + sg ++ee+g +L +fA++ +v+++f+++
MLOC_1442.1 163 MAANHAILEAVEGFAVVHVVDLSTTHCMQIPTLIDMLASRVEGPPILRLTVADVGCSGpppaLDMSYEELGAKLVNFARSRNVTMDFRMVptspadaF 260
**************************************************88776666776678899***********************88866655 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
++ +++l++++L + Eal+Vn+++ lh+++de++ + s r+ +Lk +++l P++vvv+e++a+ ++++ + r+ a+++ + +d++++
MLOC_1442.1 261 TSLVDQLRVQQLVSDGTEALVVNCHMLLHTVPDETAGSVSltqsvsLRTMLLKSIRTLDPTLVVVAEEDAEFTAGDVVGRLRAAFNFLWIPYDAVDTF 358
5566777888887777****************9987666655466678899*********************************************** PP
GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
lp+ s++r+++E+e +g++++nv+a+eg +r+er+e ++W +r++ aGF++v+++e++a +++++l++++ g+ ++ e++ l+l+Wk++++v++Sa
MLOC_1442.1 359 LPKGSQQRRWYEAE-VGWKVENVLAQEGVDRVERQEDRARWGQRMSGAGFRSVAFGEETAGEIRTMLSEHA-AGWGMKREDDDLMLTWKGHNVVFASA 454
**************.********************************************************.889999******************** PP
GRAS 373 W 373
W
MLOC_1442.1 455 W 455
* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 458 aa
Download sequence Send
to blast |
MMQFTHAAVT APPLYPNGHH GLGLGLFLDV GAPRARPWPA AGSFPTLPPS SKISLGNLNS 60
AGCMEQLLVH CANAIEANDA TLTQQILWVL NNIAPADGDS NQRLTAAFLC ALVARASRTG 120
ACKAVTAAVA AAVESAALHV HRFTAVELAS FVDLTPWHRF GYMAANHAIL EAVEGFAVVH 180
VVDLSTTHCM QIPTLIDMLA SRVEGPPILR LTVADVGCSG PPPALDMSYE ELGAKLVNFA 240
RSRNVTMDFR MVPTSPADAF TSLVDQLRVQ QLVSDGTEAL VVNCHMLLHT VPDETAGSVS 300
LTQSVSLRTM LLKSIRTLDP TLVVVAEEDA EFTAGDVVGR LRAAFNFLWI PYDAVDTFLP 360
KGSQQRRWYE AEVGWKVENV LAQEGVDRVE RQEDRARWGQ RMSGAGFRSV AFGEETAGEI 420
RTMLSEHAAG WGMKREDDDL MLTWKGHNVV FASAWAPS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK362740 | 0.0 | AK362740.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2009M24. |
