PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_14619.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family EIL
Protein Properties Length: 556aa    MW: 61282.8 Da    PI: 4.7743
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_14619.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3477.96.4e-146814411325
                   XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
          EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                   eel++rmw+d+m+lkrlke ++++ +++ a      +  k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lra
  MLOC_14619.3  81 EELERRMWRDRMKLKRLKELQQSRGKEQAAGgggvGDGLKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVSGASDNLRA 177
                   8*********************9875555558888788899******************************************************** PP

                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
          EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                   WWkekv+fdrngpaai+kyqa+n+++++es+l + +++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWP+G+e+ww+elg++kdq
  MLOC_14619.3 178 WWKEKVRFDRNGPAAIAKYQADNAVPGSESELAS-GTASPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGISPPWWPSGDEEWWPELGIPKDQ 273
                   ********************************66.************************************************************** PP

                   -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX....XXXX....XXXXXXXXXX CS
          EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss....slrk....qspkvtlsce 279
                   g+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake  ++l+v++qee+++ ++++  +            ++ ++++s+ 
  MLOC_14619.3 274 GPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELFMRLHPGARppatA--AggiaSAISFNASS- 367
                   ************************************************************************94434441..23332555555555. PP

                   XXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXX.. CS
          EIN3 280 qkedvegkkeskikhvqavktta............................gfpvvrkrkkkpsesakvsskev 325
                   +++dv++ ++ k  ++ ++k ++                            +++ v+kr +  +e++ + +++v
  MLOC_14619.3 368 SEYDVDVADDCKGDEAGTHKMAMadptafnlgaailndkflmqapmkeetaDMEYVQKRSAVAAEPELMLNNRV 441
                   599***7777776777666665578888***********************9********99999999999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.3E-13281337No hitNo description
Gene3DG3DSA:1.10.3180.104.5E-74211345IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.42E-61216341IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0009873Biological Processethylene-activated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MMGGGGGLLM DQGMAFPGVH NFVDLLQQNG NDKNLGFGSL MPQTSSGDQC VMGEGDLVDP  60
PTDNFPDAGE DDSDDDVDDI EELERRMWRD RMKLKRLKEL QQSRGKEQAA GGGGVGDGLK  120
PRQSQEQARR KKMSRAQDGI LKYMLKMMEV CRAQGFVYGI IPEKGKPVSG ASDNLRAWWK  180
EKVRFDRNGP AAIAKYQADN AVPGSESELA SGTASPHSLQ ELQDTTLGSL LSALMQHCDP  240
PQRRFPLEKG ISPPWWPSGD EEWWPELGIP KDQGPPPYKK PHDLKKAWKV SVLTAVIKHM  300
SPDIEKIRRL VRQSKCLQDK MTAKEISTWL AVVKQEEELF MRLHPGARPP ATAAGGIASA  360
ISFNASSSEY DVDVADDCKG DEAGTHKMAM ADPTAFNLGA AILNDKFLMQ APMKEETADM  420
EYVQKRSAVA AEPELMLNNR VYMGNDDVTI IERPNSLTPG TQMDEGFFGQ GNGIGGNGDS  480
MFSDVSNMMQ QQQQQQPQQQ QQAPAQQQFF IRDETPQFGN QMGGISGASD FRFGSGFNMS  540
GAVDYPQKND GPNWYY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-752143451132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-752143451132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00367DAPTransfer from AT3G20770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_14619.3
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2483110.0AK248311.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf51m23, mRNA sequence.
GenBankAK3638910.0AK363891.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2019M20.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198090.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3M00.0EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLA0A446S4T90.0A0A446S4T9_TRITD; Uncharacterized protein
STRINGMLOC_14619.10.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-142ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]