PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_15316.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 211aa    MW: 22755.7 Da    PI: 9.4073
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_15316.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.14.5e-0961123163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   eke kr rr   NRe+Ar   +R++a  +eL++kv+ L ++N+ +kke ++  +++ +lk  +
  MLOC_15316.1  61 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLASQNENMKKEKDMVLEQYLTLKETN 123
                   89*******************************************************999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001705.1E-761123IPR004827Basic-leucine zipper domain
SMARTSM003384.3E-1061125IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.65763126IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-765121No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-465129No hitNo description
CDDcd147022.36E-1466116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MEAEDEELAS TRLSLELGNV GIQSSPCSSS SSGAGQQPPQ SSAAVTGYGL SRPRHTLTEA  60
EKEAKRLRRV LANRESARQT ILRRQAIRDE LARKVADLAS QNENMKKEKD MVLEQYLTLK  120
ETNKQLKQQV AKTTKKKPSS APAFTPMDIA PPAQSAEATP PQTPPQPSFL YSAPPTSMPV  180
PYVWGSWPPC GPGVYEHGGN LAGMAGHAPP P
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_15316.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3596220.0AK359622.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1100C17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191657.11e-85uncharacterized protein LOC109777431 isoform X1
RefseqXP_020191661.11e-85uncharacterized protein LOC109777431 isoform X2
TrEMBLA0A287NI951e-150A0A287NI95_HORVV; Uncharacterized protein
STRINGMLOC_15316.11e-153(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.13e-21bZIP family protein