PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_17213.10
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 207aa    MW: 22996.1 Da    PI: 5.9588
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_17213.10genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like48.12.5e-1513412755
        G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                   AtPk +l +m+v+g+t++hvkSHLQkYRl
  MLOC_17213.10 13 ATPKGVLTVMGVPGITIYHVKSHLQKYRL 41
                   9***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.6E-61341IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.1E-141342IPR009057Homeodomain-like
TIGRFAMsTIGR015579.1E-111342IPR006447Myb domain, plants
PfamPF143792.7E-2474119IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MQLHNLVDQI VGATPKGVLT VMGVPGITIY HVKSHLQKYR LAKYIPESPA EGSKEEKKDS  60
SDSLSNTDSA PGSQINEALK MQMEVQKRLH EQLEVQKQLQ LRIEAQGKYL QMIIEEQQKL  120
GGSLEGSEER KLSHSPPSLD DYPDSMRPSP KKPRLDDLSP DAVRGVTQPG FESHLVGPWD  180
QELCPKNICA PAFQVDEFKA DPGLSKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_17213.10
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3551770.0AK355177.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1016P09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020198212.11e-132myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW02e-51PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLM0V2F91e-149M0V2F9_HORVV; Uncharacterized protein
STRINGMLOC_17213.31e-140(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-49G2-like family protein