PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_32433.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family WRKY
Protein Properties Length: 92aa    MW: 9819.95 Da    PI: 11.3555
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_32433.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.62.2e-126084125
                  ---SS-EEEEEEE--TT-SS-EEEE CS
          WRKY  1 ldDgynWrKYGqKevkgsefprsYY 25
                  ldDgy+WrKYGqK vk+s fpr  Y
  MLOC_32433.2 60 LDDGYRWRKYGQKAVKNSAFPRYTY 84
                  59********************766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-134684IPR003657WRKY domain
SuperFamilySSF1182901.83E-105284IPR003657WRKY domain
PROSITE profilePS5081113.8385592IPR003657WRKY domain
SMARTSM007747.2E-46091IPR003657WRKY domain
PfamPF031066.7E-96184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MVNGRAAGAA APEIGAGSSS GVGVGRDQET KGKGGARGRG SRKASRPRFA FQTKSENDVL  60
DDGYRWRKYG QKAVKNSAFP RYTYMPIASR HG
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_32433.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8404123e-71DQ840412.1 Hordeum vulgare subsp. vulgare WRKY transcription factor 13 (WRKY13) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020160818.14e-31probable WRKY transcription factor 75
TrEMBLA0A287GH715e-58A0A287GH71_HORVV; Uncharacterized protein
STRINGMLOC_32433.14e-41(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.27e-18WRKY DNA-binding protein 43