PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_38843.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 144aa    MW: 16175.3 Da    PI: 11.0835
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_38843.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.32.9e-1264115152
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                   e++++r+rrk +NR++A+rsR+RK++++eeL+  v+ + ae ++L+ +l   
  MLOC_38843.1  64 EERRRRQRRKVSNRLSAQRSRARKQQRLEELRGTVARFRAEKRELAAKLHAV 115
                   6889******************************************998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-860115No hitNo description
SMARTSM003381.5E-662128IPR004827Basic-leucine zipper domain
PfamPF001701.1E-764114IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.19766129IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.12E-868116No hitNo description
PROSITE patternPS0003607186IPR004827Basic-leucine zipper domain
CDDcd147028.61E-973118No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MLSLQEAIGL DMDAMTSGFG FTPWEADTCP TLEELMAASS TTSSPSSSGG AAADQGHGLV  60
EDEEERRRRQ RRKVSNRLSA QRSRARKQQR LEELRGTVAR FRAEKRELAA KLHAVARHEL  120
AVRRQNARLR TEEAALKRRL GYLL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_38843.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020156626.15e-65ocs element-binding factor 1-like
TrEMBLM0VZC73e-97M0VZC7_HORVV; Uncharacterized protein
STRINGMLOC_38843.16e-98(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429