PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_43888.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 158aa    MW: 17261.7 Da    PI: 5.2803
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_43888.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000632183955
                  TCHHHHHHHHHHHHHHH CS
           HLH 39 sKaeiLekAveYIksLq 55
                  +Ka+i + Av YI +Lq
  MLOC_43888.1  2 DKASIIQDAVAYIEELQ 18
                  8***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.9E-5132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MDKASIIQDA VAYIEELQEQ ERRILAEVSD LEAGGCTAVV KSEASTGSEG VENAGVGFSR  60
RKKMRRTSSS SSINDAVASP ATHPVEIFEL EVTPIEEKLA VVSMRHNNTQ HVMAKMYKAL  120
DSLCLKVITS SVAVADGRTV HTMFIEVIIR DLLYFSSN
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_43888.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703064e-93HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186745.14e-83transcription factor bHLH35-like
TrEMBLM0W5751e-111M0W575_HORVV; Uncharacterized protein
STRINGMLOC_43888.21e-101(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.23e-17bHLH family protein