PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_56761.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 200aa    MW: 21856.9 Da    PI: 8.48
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_56761.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.11.2e-156352655
       G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                  +AtPktil++m+vkgLtl h+kSHLQkYR+
  MLOC_56761.2  6 EATPKTILRTMGVKGLTLFHLKSHLQKYRM 35
                  7****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015573.0E-10536IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.608.1E-14636IPR009057Homeodomain-like
SuperFamilySSF466891.7E-5636IPR009057Homeodomain-like
PfamPF143794.6E-2076121IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010628Biological Processpositive regulation of gene expression
GO:0016036Biological Processcellular response to phosphate starvation
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MTALAEATPK TILRTMGVKG LTLFHLKSHL QKYRMGKQTG KETPEQSKDG SYLLDAQGGM  60
SLSPRVSTQD AKESQEVKEA LRAQMEMQRS LHEQVEVQKH VDIRMDAYTT YINTLLEKAC  120
KIVSEQFASS GFSVSDQSLP ELSSGGVMCG TATDALSSSV FHQLSVSSIN MHSPGGKPSP  180
SGMEGQLLLQ RSPEFKRKSC
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
UniProtTranscriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00378DAPTransfer from AT3G24120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_56761.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3636650.0AK363665.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2017P09.
GenBankAK3673540.0AK367354.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2055J10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195363.11e-138protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195364.11e-138protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195365.11e-138protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195366.11e-138protein PHR1-LIKE 2-like isoform X2
RefseqXP_020195367.11e-138protein PHR1-LIKE 2-like isoform X2
SwissprotQ8LAJ72e-41PHL3_ARATH; Protein PHR1-LIKE 3
SwissprotQ94A573e-41PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A446T1N61e-142A0A446T1N6_TRITD; Uncharacterized protein
STRINGTraes_5AL_0684A2454.11e-140(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.11e-43G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Sanz-Fernández M, et al.
    Screening Arabidopsis mutants in genes useful for phytoremediation.
    J. Hazard. Mater., 2017. 335: p. 143-151
    [PMID:28441590]