PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58529.8
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 259aa    MW: 27460.3 Da    PI: 9.9134
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58529.8genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.22.3e-20178240163
                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                   e+e+k+++rkq+NRe+ArrsR+RK+ae ee + +++ L++eN++Lk+el++l++++++l+se+
  MLOC_58529.8 178 EREVKKQKRKQSNRESARRSRLRKQAEWEEVASRADLLKQENSSLKEELKQLQEKCDSLTSEN 240
                   799**********************************************************98 PP
2bZIP_119.81.7e-062232502552
                   HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleel 52 
                   k+e+++L+ek+++L++eN++L ++l+  
  MLOC_58529.8 223 KEELKQLQEKCDSLTSENTSLHEKLKAV 250
                   799*******************999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165965.4E-1618146No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-15173236No hitNo description
PfamPF001702.6E-18178240IPR004827Basic-leucine zipper domain
SMARTSM003386.2E-20178242IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.461180243IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.44E-10181237No hitNo description
CDDcd147027.58E-19183234No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
TSGAGGSETD KSNKNKRKTP LKRSKGSLGS LDVVTVKDKT PPPKSLVSSS NEGSSQSESG  60
SGSYSGGSST NSKSGSQTKD GSEHGPANDA SNKGVTAQGT AVEPTQVSSG PVVLNPMMPY  120
WPVPPPMPGQ ATGVNMGMDY WGAPTSVPMH GKAVAAPTSA PSSNSRDIVL SDPVIQDERE  180
VKKQKRKQSN RESARRSRLR KQAEWEEVAS RADLLKQENS SLKEELKQLQ EKCDSLTSEN  240
TSLHEKLKAV DSEKPNGNL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1194200RRSRLRK
2194201RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_58529.8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2524800.0AK252480.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf155l09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189439.11e-142bZIP transcription factor 16-like isoform X1
RefseqXP_020189441.11e-142bZIP transcription factor 16-like isoform X1
RefseqXP_020189442.11e-142bZIP transcription factor 16-like isoform X1
RefseqXP_020189443.11e-142bZIP transcription factor 16-like isoform X1
RefseqXP_020189444.11e-142bZIP transcription factor 16-like isoform X2
TrEMBLA0A287PCY20.0A0A287PCY2_HORVV; Uncharacterized protein
TrEMBLM0XBA30.0M0XBA3_HORVV; Uncharacterized protein
TrEMBLM0XBA40.0M0XBA4_HORVV; Uncharacterized protein
TrEMBLM0XBA60.0M0XBA6_HORVV; Uncharacterized protein
STRINGMLOC_58529.30.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-42basic region/leucine zipper transcription factor 16