PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_58614.4
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 121aa    MW: 12967.6 Da    PI: 11.5851
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_58614.4genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.52.5e-1273106336
                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 
                   + k  rr+++NReAAr+sR+RKka+i++Le+   
  MLOC_58614.4  73 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRV 106
                   67999************************97443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.003471120IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-971117No hitNo description
PROSITE profilePS502178.89873117IPR004827Basic-leucine zipper domain
PfamPF001701.2E-974115IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-775115No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MHVVAEPSPK AATSASNIIA ASSNLKLQRP PSNSKQSSMP APGGKATVKR EGSGSGGAGT  60
PSTSEHEGPR TPDAKTLRRL AQNREAARKS RLRKKAYIQN LETSRVRLSQ MEQEMQRCSA  120
Q
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_58614.4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689310.0AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020178471.12e-71transcription factor TGAL9-like isoform X4
SwissprotQ0E3421e-27TGAL9_ORYSJ; Transcription factor TGAL9
TrEMBLA0A287E2H23e-80A0A287E2H2_HORVV; Uncharacterized protein
STRINGMLOC_58614.33e-80(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.35e-21bZIP family protein
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]