PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_60135.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 205aa    MW: 21991.5 Da    PI: 10.0747
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_60135.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.77.2e-15109155450
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   + r+ r++kNRe+A rsR+RK+a++ eLe + ++L  eN++L k+ +
  MLOC_60135.1 109 VDRQLRMIKNRESAARSRARKQAYTNELEMELAQLRRENQMLVKREQ 155
                   679***************************************98755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-7106170IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.691108160IPR004827Basic-leucine zipper domain
PfamPF001702.7E-12111155IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10111159No hitNo description
CDDcd147079.38E-21111155No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-12111160No hitNo description
PROSITE patternPS000360114128IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MEELWKDMSL PSTPAALQSY HIHSPAVAPY HAAAYLAGPV PLPRGPPYTA LTLSSSVEFA  60
FPGGGSSGKP TGSTSSNDYS FGFPSASASG PKSSNNNGKR VQVNAPAAVD RQLRMIKNRE  120
SAARSRARKQ AYTNELEMEL AQLRRENQML VKREQDFINE SSATAAQAVI PDCSSGGGGG  180
RSRSSRPTLH FELEQRQRCR SAPAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_60135.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3758360.0AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164874.11e-69protein FD-like
TrEMBLM0XHR91e-148M0XHR9_HORVV; Uncharacterized protein
STRINGMLOC_60135.11e-149(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-17basic region/leucine zipper motif 27