PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_60894.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 260aa    MW: 27538.9 Da    PI: 6.4072
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_60894.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.33.4e-0883126851
                   HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                   +r   NR A r++R++Kka ++ Lee+v  L+a Nk+L k+l++
  MLOC_60894.1  83 KRPSGNRAAVRKYREKKKAHTALLEEEVVRLKALNKQLLKKLQS 126
                   55566**********************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-578143IPR004827Basic-leucine zipper domain
PfamPF077164.5E-1381133IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-681127No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-1282144No hitNo description
CDDcd146867.57E-1188126No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071294Biological Processcellular response to zinc ion
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MDDGDLDFSN PEAYLDAAGG GCSMDSYFDG ILNDTEHLAC THTHTCNPPV DDSSHTHTCV  60
HVHTKIVSAS SDDSPAGNGA SKKRPSGNRA AVRKYREKKK AHTALLEEEV VRLKALNKQL  120
LKKLQSHAAL EAEAARLRCL LVDVRGRIEG EIGAFPYQRP AKNVDLVSSG VDQGGFLGSA  180
QVTINSCDFR CNDQMYCNPG MQMRAMGDDG AMSGQMFGQG AGDVANIQCI GSAKSGLTMP  240
PGCGGMGTMP SGCLPSSEKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_60894.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9606335e-63EU960633.1 Zea mays clone 226818 DNA binding protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020168902.11e-161basic leucine zipper 23-like
TrEMBLA0A287Q8H30.0A0A287Q8H3_HORVV; Uncharacterized protein
STRINGMLOC_60894.40.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41753572
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.14e-44bZIP family protein