PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_62430.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 196aa    MW: 21449.1 Da    PI: 9.5055
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_62430.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.33.4e-13100159463
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    +r rr+ +NRe+ArrsR RK++++ eL   v  L + N++L ++l++    +++l  ++
  MLOC_62430.1 100 ERRRRRMVSNRESARRSRMRKQKQLSELWAQVVHLRGANRQLLDQLNRVIRDCDRLLRDN 159
                   5899*************************************************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-1397161IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.9E-1098155No hitNo description
PfamPF001709.6E-1199159IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.49699155IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.28E-11101151No hitNo description
PROSITE patternPS000360104119IPR004827Basic-leucine zipper domain
CDDcd147022.24E-13106153No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MYPAELASVP YLSAAAAISA AFRPHYQVVA PDDLVFPYNG GGLLVPQATS SPSSSSYQQQ  60
QQLLHEAAGG GGLLPPFGAR SSNSDESDGY QQAHCSLAEE RRRRRMVSNR ESARRSRMRK  120
QKQLSELWAQ VVHLRGANRQ LLDQLNRVIR DCDRLLRDNS GLRDERAKLR ERLQQLPAAA  180
AAAVPVEDAA AAAQGC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100121RRRRRMVSNRESARRSRMRKQK
2113120RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00647PBMTransfer from LOC_Os02g49560Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_62430.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ2348391e-137AJ234839.1 Hordeum vulgare genomic DNA fragment; clone MWG2212.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020182325.12e-92basic leucine zipper 63-like
TrEMBLA0A287UN491e-137A0A287UN49_HORVV; Uncharacterized protein
STRINGMLOC_62430.11e-138(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38800.12e-12basic leucine-zipper 43