PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_63066.11
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 153aa    MW: 17252.2 Da    PI: 9.5271
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_63066.11genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.41.1e-2156118163
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    e+elkr++rkq+NR +ArrsR+RK+ae+eeL++++++L++eN +Lk+e+++++ke+++l s++
  MLOC_63066.11  56 ERELKRQKRKQSNRDSARRSRLRKQAECEELAQRAEVLKQENASLKDEVSRIRKEYDELLSKN 118
                    89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-1850115No hitNo description
SMARTSM003385.2E-2156120IPR004827Basic-leucine zipper domain
PfamPF001709.7E-2156118IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.08258121IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-1159115No hitNo description
CDDcd147024.45E-1961112No hitNo description
PROSITE patternPS0003606378IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MQMPSSGPVP GPTTNLKIGM DYWANTASSS PALHGKVTPT AIPGDLAPTE PWMQDERELK  60
RQKRKQSNRD SARRSRLRKQ AECEELAQRA EVLKQENASL KDEVSRIRKE YDELLSKNSS  120
LKDNIGDKQH KTDEAGLHNK LQRSGDDNQK DTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17278RRSRLRK
27279RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_63066.11
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3665620.0AK366562.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2044E07.
GenBankAK3739970.0AK373997.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3050F17.
GenBankAY1506770.0AY150677.1 Hordeum vulgare subsp. vulgare bZIP transcription factor ZIP1 (ZIP1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020189928.11e-102bZIP transcription factor 16-like
SwissprotA0A3B6MPP51e-103BZP1D_WHEAT; bZIP transcription factor 1-D
SwissprotB6E1071e-103BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLA0A287QSB61e-108A0A287QSB6_HORVV; Uncharacterized protein
TrEMBLM0XU651e-109M0XU65_HORVV; Uncharacterized protein
TrEMBLM0XU721e-108M0XU72_HORVV; Uncharacterized protein
STRINGTRIUR3_34165-P11e-102(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-48basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]