PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_63597.6
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 376aa    MW: 42276.3 Da    PI: 7.1526
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_63597.6genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.96.9e-1636662555
       G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                   +AtPkt+++lm+++gLtl+h+kSHLQkYRl
  MLOC_63597.6 36 AEATPKTVMRLMGIPGLTLYHLKSHLQKYRL 66
                  58****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.24E-53367IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-143667IPR009057Homeodomain-like
TIGRFAMsTIGR015573.2E-93667IPR006447Myb domain, plants
PfamPF143791.8E-22113159IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MRSINWVEQR VSTRLYDSYL LIVHKSAEFL HSCYHAEATP KTVMRLMGIP GLTLYHLKSH  60
LQKYRLSKNL QAQVNVGTNK NTIGCAIVAD GMPGTSVPAM INTNVIPQPE KTMQIGEALQ  120
MQIEVQRQLN EQLEVQRHLQ LRIEAQGKYL QAVLEQAQES LGKQNSGPAN LEDAKLKISE  180
LVSQVSNECF GNAVTEIKES SSMHRLEPRQ IQFMESSSTN NCLAAAGGFI NEHRLHSHGM  240
LKAYDDSSIF CRKQSPGHEY QFSLNRSLSE RKMGHLHNVN EYHKAEFGSE SDTEIQHEYI  300
TAQKNGRGST TSSASGSKER DAGRLYLEEP NCKRQAVEHS GFEHPSSGKK LDLNTQNTDD  360
GDQGYRHFDL NGFSWS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_63597.6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181427.10.0myb-related protein 1-like isoform X1
RefseqXP_020181428.10.0myb-related protein 1-like isoform X1
TrEMBLA0A287G2X30.0A0A287G2X3_HORVV; Uncharacterized protein
STRINGMLOC_63597.40.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.47e-61myb-related protein 1