PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_63597.8
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 69aa    MW: 7748.65 Da    PI: 7.0886
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_63597.8genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like43.47.6e-144468125
       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                  kprl+WtpeLH+rFv+av+qLGG+e
  MLOC_63597.8 44 KPRLKWTPELHQRFVDAVNQLGGAE 68
                  79*********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.8E-124268IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-84468IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MYHQHQGPSE LFTTRTTFPM ERHLFLHGGS TQGDSGLVLS TDAKPRLKWT PELHQRFVDA  60
VNQLGGAES
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:12008900}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_63597.8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181427.19e-43myb-related protein 1-like isoform X1
RefseqXP_020181428.19e-43myb-related protein 1-like isoform X1
RefseqXP_020181429.16e-45myb-related protein 2-like isoform X2
SwissprotQ9FK478e-23PHLA_ARATH; Myb-related protein 1
TrEMBLA0A287G2Y21e-43A0A287G2Y2_HORVV; Uncharacterized protein
STRINGMLOC_63597.43e-42(Hordeum vulgare)
STRINGTraes_1AL_2CFFBD60E.23e-42(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.33e-25myb-related protein 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]