PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64597.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 337aa    MW: 36754.5 Da    PI: 11.0901
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64597.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.91.2e-091213555
       G2-like 35 lmkvkgLtlehvkSHLQkYRl 55
                  +m+v gL+++hvkSHLQ+YR+
  MLOC_64597.1  1 MMNVRGLSIAHVKSHLQMYRS 21
                  7*******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.1E-8122IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MMNVRGLSIA HVKSHLQMYR SKKLDHQGQR IRGAISSVFS PMGFHSMRGD RRFHDMLLQR  60
AAALSSTAEH GGFFASRNGG GGGNTTSRLY GILQHHHRPS LIQSGFKNCS FRNQEWAFNH  120
RDRITRKDVK ASSTTPHFFA SSSVRRWPLG SAVAGAGEQM RDESFGYFTG HGSGQHSRAM  180
PPARSVVPGG GNHRLPFRWH GSDGGKGAQA TPSDPVMIAK ALDSQQQKHI EQQRALITPA  240
DKVRLPTETP ELELSLSPAT AMDTTDGTPS KKRKKSTAAS SEQELEHCNK LSISPLSLLP  300
PAASMPMQRK EKTRGGSAEA ALGQSTLDLT MSIRALE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270274KKRKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_64597.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187256.10.0uncharacterized protein LOC109772958 isoform X1
TrEMBLA0A287TI090.0A0A287TI09_HORVV; Uncharacterized protein
TrEMBLM0Y0810.0M0Y081_HORVV; Uncharacterized protein
TrEMBLM0Y0820.0M0Y082_HORVV; Uncharacterized protein
STRINGMLOC_64597.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-11G2-like family protein