PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64644.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 188aa    MW: 20628.3 Da    PI: 4.0528
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64644.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.25.3e-09142183140
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikev.diy 40 
                   l pGfrF+Ptde++v +yLk+kv +  l+ ++  i+e+ +iy
  MLOC_64644.2 142 LIPGFRFRPTDEDIVLHYLKPKVLNLALRPHSRrIEELaNIY 183
                   579********************9998554443377765665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-9139172IPR003441NAC domain
PROSITE profilePS5100513.061142188IPR003441NAC domain
PfamPF023655.5E-6144166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MENATVASSS MYTQLGGNSD NDSPDWRELT FKDTTDKFFG TDLDACPDNI VCSDSNINSH  60
CGATMTTSNN TMVSSSTQLG GSSNDPTSSA AEQPEDGNND HNDDSDSMNS SIITTEHRDV  120
PNEQSTETST EVAETSSTPW QLIPGFRFRP TDEDIVLHYL KPKVLNLALR PHSRRIEELA  180
NIYALFII
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_64644.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195281.15e-51NAC domain-containing protein 92-like
TrEMBLA0A287IT421e-135A0A287IT42_HORVV; Uncharacterized protein
TrEMBLA0A287IT791e-136A0A287IT79_HORVV; Uncharacterized protein
STRINGMLOC_64644.21e-137(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2924944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.13e-07NAC domain containing protein 6