PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64644.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 122aa    MW: 13516.6 Da    PI: 4.3582
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64644.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.22.6e-0978119140
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikev.diy 40 
                   l pGfrF+Ptde++v +yLk+kv +  l+ ++  i+e+ +iy
  MLOC_64644.3  78 LIPGFRFRPTDEDIVLHYLKPKVLNLALRPHSRrIEELaNIY 119
                   579********************9998554443377765555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-975108IPR003441NAC domain
PROSITE profilePS5100513.52978122IPR003441NAC domain
PfamPF023653.1E-680102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MTTSNNTMVS SSTQLGGSSN DPTSSAAEQP EDGNNDHNDD SDSMNSSIIT TEHRDVPNEQ  60
STETSTEVAE TSSTPWQLIP GFRFRPTDED IVLHYLKPKV LNLALRPHSR RIEELANIYA  120
RL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_64644.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195281.17e-52NAC domain-containing protein 92-like
TrEMBLA0A287IT293e-83A0A287IT29_HORVV; Uncharacterized protein
TrEMBLA0A287IT326e-83A0A287IT32_HORVV; Uncharacterized protein
TrEMBLA0A287IT833e-83A0A287IT83_HORVV; Uncharacterized protein
TrEMBLA0A287IT997e-84A0A287IT99_HORVV; Uncharacterized protein
STRINGMLOC_64644.23e-82(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39610.11e-07NAC domain containing protein 6