PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_66099.1
Common NameBel2, JuBel2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family TALE
Protein Properties Length: 611aa    MW: 66033.5 Da    PI: 8.1179
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_66099.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.75.5e-103644011954
                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                   Fe   ++yp+  +++ LAk++gLt +qV++WF N R +
  MLOC_66099.1 364 FEHflHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVR 401
                   554459******************************88 PP
2BELL88.57e-29228296472
          BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   e q kk++L+s++eeV+krY+qy++q+q  i+sFe+vag  +a+p+t+lAl+ +++hF+ +k++i +q+
  MLOC_66099.1 228 EQQWKKTRLISMMEEVCKRYRQYYQQVQSAIASFETVAGFSNAAPFTALALRVMAKHFKTIKEMILSQL 296
                   8899**************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.1E-32164294IPR006563POX domain
PfamPF075264.9E-34169292IPR006563POX domain
PROSITE profilePS5007112.26342405IPR001356Homeobox domain
CDDcd000867.02E-13345406No hitNo description
SMARTSM003893.8E-10345409IPR001356Homeobox domain
SuperFamilySSF466897.7E-17347413IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.5E-28348409IPR009057Homeodomain-like
PfamPF059206.5E-19362401IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MSSPAGGYGG AEAHHHGHML LHSHAHHMAA AAAASGGQLY HVPQHSRREK LRFPPDAAAE  60
DSPPTPLAPH HQHHQAGAWP PPAFYSYASS SSSYSPHSPT VPQGQQLVLN GLTAQQVTAQ  120
QFPHIPTHNF SLSLSSASSN PATAPPTPRK QQEPGGAGPC GPFTGYASVL GRSKFLVPAQ  180
RLLEEICDVG GAAAHADRSL PDEGLLDADT MDVADDELDA AGPMYGAEQQ WKKTRLISMM  240
EEVCKRYRQY YQQVQSAIAS FETVAGFSNA APFTALALRV MAKHFKTIKE MILSQLRNTS  300
KMPVKGSSMS KDITIFGLGG GGGAPVGGFQ RGSSVNGFGQ PHNIWRPQRG LPERSVTVLR  360
AWLFEHFLHP YPTDGDKQML AKQTGLTRNQ VSNWFINARV RLWKPMVEEI HNLEMRQVHK  420
QSPHDNGSQH GVHGHAHQPS SQQQQQQRSG KRSEPCDSHL GQCSGVTRNH HHHSNPAASS  480
HGGGFPDDLS QMSHSMQQGQ VTFAGYGALP SQSQQHQHQH QHSSMASPQH PHHQHHVGAA  540
GAGNGGGVSL TLGLHQNNRV CFGEPLPANL AHRFGLEDVV SDPYVMGSFG GGQDRHFAKE  600
IGGHLLHDFV G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-16351409563Homeobox protein Meis2
3k2a_B6e-16351409563Homeobox protein Meis2
4xrm_A7e-16351409563Homeobox protein Meis2
4xrm_B7e-16351409563Homeobox protein Meis2
4xrs_A5e-16351408158Homeobox protein Meis1
4xrs_B5e-16351408158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_66099.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3595730.0AK359573.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1099E23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020175344.10.0BEL1-like homeodomain protein 9
TrEMBLD0EL830.0D0EL83_HORVV; Bell-like homeodomain protein
TrEMBLQ94KS40.0Q94KS4_HORVU; Bell-like homeodomain protein
STRINGMLOC_66099.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.17e-72TALE family protein
Publications ? help Back to Top
  1. M
    In vitro interactions between barley TALE homeodomain proteins suggest a role for protein-protein associations in the regulation of Knox gene function.
    Plant J., 2001. 27(1): p. 13-23
    [PMID:11489179]
  2. Dabbert T, et al.
    The genetics of barley low-tillering mutants: low number of tillers-1 (lnt1).
    Theor. Appl. Genet., 2010. 121(4): p. 705-15
    [PMID:20407739]