PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_6711.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 383aa    MW: 40444.4 Da    PI: 9.5133
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_6711.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.79.2e-22243305163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l k ++kl+ e+
  MLOC_6711.1 243 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLAKSSEKLRLEN 305
                  799********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.3E-29192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.7E-16238302No hitNo description
SMARTSM003381.2E-21243307IPR004827Basic-leucine zipper domain
PfamPF001701.2E-20243305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.07245308IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-11246301No hitNo description
CDDcd147028.80E-22248296No hitNo description
PROSITE patternPS000360250265IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MAHDEAVSAQ KTGKSGSPPK DQPAPCPYPD WSAMQAYYGS GVMPPAYFAP AIAAGHPPPP  60
YMWGPQHMMP PPFGTPYAMY SHGGAYPHPL VPMMANPLSV EPAKSANSKD KSSNKKLKEI  120
DGSAVSTGSG NSKKTTSSGD YSGEGSSDVN DLKVSGTPRK RSLDGGFDTE ATAAARNKDV  180
VASNPTIRNG TILPNQCFPA PVIKPSVTNV ANSRAIGTPV SPLPGVMAPI HTGISTELSS  240
KDEREVKREK RKQSNRESAR RSRLRKQAET EELATQVESL TAENTSLKSE IGKLAKSSEK  300
LRLENSALVV KLKGAAAPAD AEMPLDKSAA AAAPSSSPRI VENFLSMIDD TNKSGVNNHM  360
EHSEPKLRQL LGSSTTTDVV AAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259265RRSRLRK
2259266RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_6711.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2496860.0AK249686.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf48a15, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151704.10.0common plant regulatory factor 1-like
RefseqXP_020151705.10.0common plant regulatory factor 1-like
TrEMBLM0Y9U50.0M0Y9U5_HORVV; Uncharacterized protein
STRINGMLOC_6711.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.15e-32G-box binding factor 2