PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_67883.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 183aa    MW: 19167.5 Da    PI: 9.9668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_67883.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.61.7e-094302955
           AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
                  +r++lg+f+tae+Aa a+++a+++++g
  MLOC_67883.1  4 ARVWLGTFDTAEDAAIAYDEAALRFKG 30
                  89*********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.552138IPR001471AP2/ERF domain
SMARTSM003808.9E-9144IPR001471AP2/ERF domain
CDDcd000186.57E-16139No hitNo description
PfamPF008475.7E-5230IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-17239IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-11339IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
KKAARVWLGT FDTAEDAAIA YDEAALRFKG TKAKLNFPER VQGRTDLGFV VTRGIPDRLQ  60
QQQHYPAAVG APAMRPPLHQ QQAVVPYPDL LRYAQLLQGA GSAGGAVNLP FGAMSPPSMS  120
SSSSPHILDF STQQLIRVSP ASPAAAISGS ATTGPSTSSS TTTASSPGAA WPYTGEQKNN  180
KDS
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_67883.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3682540.0AK368254.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2070P06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191321.13e-94ethylene-responsive transcription factor ERF113-like
TrEMBLF2DWI61e-128F2DWI6_HORVV; Predicted protein
STRINGMLOC_67883.11e-130(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44473571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.15e-14related to AP2 6l