PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_68369.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family WRKY
Protein Properties Length: 153aa    MW: 16685.6 Da    PI: 10.6997
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_68369.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY284.3e-09134153322
                   -SS-EEEEEEE--TT-SS-E CS
          WRKY   3 DgynWrKYGqKevkgsefpr 22 
                   Dgy+WrKYGqK+++ + +pr
  MLOC_68369.2 134 DGYQWRKYGQKQIEAAMHPR 153
                   9***************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-8122153IPR003657WRKY domain
SuperFamilySSF1182905.1E-7125153IPR003657WRKY domain
PROSITE profilePS508119.557134153IPR003657WRKY domain
PfamPF031061.4E-6134153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MQRSRGCAPG GEHGWAAADG GGMQLQRRER ELVAQLHELL YPSTSPSRSG ASSCSGLAAE  60
LYWEHGSSQV KATASCGGGK RRGGRKRARE DERHEEGQGQ RAGAATATKA TTRCRRKKLG  120
TTTRTLVTTV PDFDGYQWRK YGQKQIEAAM HPR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_68369.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696621e-179EU669662.1 Triticum aestivum WRKY32 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196414.12e-60WRKY transcription factor 22-like
TrEMBLA0A287R1T51e-104A0A287R1T5_HORVV; Uncharacterized protein
TrEMBLA0A287R2881e-106A0A287R288_HORVV; Uncharacterized protein
STRINGMLOC_68369.11e-106(Hordeum vulgare)