PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_68749.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 184aa    MW: 19781.9 Da    PI: 7.0448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_68749.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1408.5e-1388133550
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   +++rr+++NRe+ArrsR RK+ +++eL  +++ L aeN++L  el+
  MLOC_68749.1  88 RKTRRLASNRESARRSRVRKQRRLDELSSRAARLRAENQRLLVELN 133
                   689**************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-1184148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-985135No hitNo description
PROSITE profilePS5021711.02486149IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.45E-988136No hitNo description
PfamPF001706.5E-1088134IPR004827Basic-leucine zipper domain
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MQRHGAACGI ACHSGAGLAA AGVFMLPQVY DPHGVHGQYQ YDLASLSDMV APYTDYNGGN  60
PAVGWVPPGG GAVDDDGRTA CRGNGDERKT RRLASNRESA RRSRVRKQRR LDELSSRAAR  120
LRAENQRLLV ELNGVLAEHG RVARESARLR EEASELRAKL DGMGVDEADV DVAPQSTEDT  180
GNTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100106RRSRVRK
2100107RRSRVRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_68749.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3658600.0AK365860.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2038F22.
GenBankAK3721470.0AK372147.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147D05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164231.17e-94basic leucine zipper 43-like
TrEMBLA0A287TWJ31e-130A0A287TWJ3_HORVV; Uncharacterized protein
STRINGMLOC_68749.11e-131(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735