PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_69454.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family Dof
Protein Properties Length: 125aa    MW: 13092.3 Da    PI: 4.9187
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_69454.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof39.11.6e-12104125526
        zf-Dof   5 alkcprCdstntkfCyynnysl 26 
                    l+cprCdstntkfCy+nnysl
  MLOC_69454.1 104 GLNCPRCDSTNTKFCYFNNYSL 125
                   689*****************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-1488125IPR003851Zinc finger, Dof-type
PfamPF027013.6E-9105124IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MVFLPAFLDS SNFWNTDHNQ LIQMQQIGTN THSTTTPSQD GPGAGGCSNN NQEGFMAMAG  60
AGGSGDVGCG GAEDGDCGGS GNRKSTSSMS ERARLARLPQ PVPGLNCPRC DSTNTKFCYF  120
NNYSL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_69454.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181317.17e-37dof zinc finger protein DOF5.1-like
TrEMBLA0A287MTK12e-85A0A287MTK1_HORVV; Uncharacterized protein
STRINGMLOC_69454.14e-88(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.21e-16OBF-binding protein 3