 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
MLOC_70809.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
|
| Family |
GATA |
| Protein Properties |
Length: 341aa MW: 36648.4 Da PI: 8.6586 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| MLOC_70809.3 | genome | IBSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.9 | 1.2e-17 | 177 | 210 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
MLOC_70809.3 177 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKVR 210
*******************************976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MSTIYMSQLS TLPLMDGDQD QGHFQAFHLP KDPPILFPFM IDNPVDHQGQ GCGDQHSGQH 60
LFGESSQQFN DRMMMGGGSA DVFATCSPFG PTIQSIGSDM IQRSSYNSYD FEATHASDGS 120
TSQWASAKPP VKMRIMRKAP TNDPQGGMVR KPRRRAQAHQ ADESQQLQHA MGVIRVCSDC 180
NTTKTPLWRS GPCGPKSLCN ACGIRQRKVR RAMAAAAATG ANGGVASASS GGVASGGVQT 240
SEASQAVKAT KKEKRAADLD RSLPFKKRCK MVDHPTVTST KVVAVDATPK HQDHVVSEDV 300
ATVERLSKAD PPAAFTHVFV RDEITDAAML LMTLSCGLVR S
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK360760 | 0.0 | AK360760.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1124O05. |
