PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_71642.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 76aa    MW: 8385.72 Da    PI: 10.1681
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_71642.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.51.2e-0712542163
                  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                  R RKk+++ e ++ v +L+aeN  L++e+e+l+  +++l +e+
  MLOC_71642.3 12 RSRKKMRLPEVKQMVLSLSAENAVLRQEMESLQMACKALSKEN 54
                  99*************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-6951No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MPAPPPRAAG QRSRKKMRLP EVKQMVLSLS AENAVLRQEM ESLQMACKAL SKENGTLEVS  60
ATHAHYYTNL NFSVAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11117RSRKKMR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_71642.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3684107e-90AK368410.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2073D08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196993.11e-25uncharacterized protein LOC109782791
TrEMBLA0A287XVL04e-36A0A287XVL0_HORVV; Uncharacterized protein
TrEMBLA0A287XVM51e-37A0A287XVM5_HORVV; Uncharacterized protein
TrEMBLA0A287XVS19e-38A0A287XVS1_HORVV; Uncharacterized protein
STRINGMLOC_71642.43e-48(Hordeum vulgare)