PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72252.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 88aa    MW: 9174.39 Da    PI: 8.2504
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72252.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like36.11.4e-116387125
       G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                  k+r++W+peLH+rFv a+++LGG++
  MLOC_72252.1 63 KARRCWSPELHRRFVAALQHLGGPQ 87
                  68*********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-96087IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-76386IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MPLNGLPNLA KSLERPEAAA MAVPELSLSS PAIDAPCMAA PSADSSAVTD AGAQSQQQSA  60
QRKARRCWSP ELHRRFVAAL QHLGGPQG
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_72252.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3757601e-141AK375760.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3103I10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151221.12e-47myb family transcription factor EFM-like
TrEMBLA0A287QI901e-55A0A287QI90_HORVV; Uncharacterized protein
STRINGMLOC_72252.24e-55(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.14e-11G2-like family protein