PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72252.2
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 258aa    MW: 27224.7 Da    PI: 9.4172
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72252.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.87.8e-11233257125
       G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                   k+r++W+peLH+rFv a+++LGG++
  MLOC_72252.2 233 KARRCWSPELHRRFVAALQHLGGPQ 257
                   68*********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.5E-8230257IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MGSSSAVQKE AVVLGGGGGA GEDHRLRALA ARTMTDSLRA AVARSSSAEK VARLEDCARS  60
LEAEKAKMEV FRRELPISVH LIADVIEWLK DEVAQHRRPA PDQLLAPAPS PSPAPLAKRK  120
AEGVKTEADA SDKRSWMSSA QLWTCGSHSS TSNSNGDSAK KHAQKVANAF MPLNGLPNLA  180
KSLERPEAAA MAVPELSLSS PAIDAPCMAA PSADSSAVTD AGAQSQQQSA QRKARRCWSP  240
ELHRRFVAAL QHLGGPQG
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_72252.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3757600.0AK375760.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3103I10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151221.11e-149myb family transcription factor EFM-like
TrEMBLA0A287QIM30.0A0A287QIM3_HORVV; Uncharacterized protein
STRINGMLOC_72252.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-17G2-like family protein