PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72368.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 108aa    MW: 12494.3 Da    PI: 12.2234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72368.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11549246
                  XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                  ++++  rr   NR +A+rsR RK+++i eLe+ v +L++e +aL 
  MLOC_72368.3  5 RPRRHNRRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALS 49
                  67788999*******************************998886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.5E-11468IPR004827Basic-leucine zipper domain
PfamPF001701.9E-10459IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243662IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-11862No hitNo description
Gene3DG3DSA:1.20.5.1704.8E-14962No hitNo description
PROSITE patternPS0003601126IPR004827Basic-leucine zipper domain
CDDcd147031.21E-191159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
PISQRPRRHN RRILANRQSA QRSRVRKLQY ISELERSVTS LQTEVSALSP RVAFLDHQRS  60
LLTLGNSHLK QRIAALAQDK IFKDGDRHCH PSQLLVFRNF APATVKFN
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_72368.3
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0368212e-88BT036821.1 Zea mays full-length cDNA clone ZM_BFb0141B19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015694867.14e-42PREDICTED: basic leucine zipper 2-like
SwissprotQ5QNI54e-44BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A287KV438e-65A0A287KV43_HORVV; Uncharacterized protein
STRINGTraes_3AS_6AE36A662.11e-58(Triticum aestivum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.17e-39bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]