PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_73626.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bZIP
Protein Properties Length: 180aa    MW: 19847.3 Da    PI: 8.9669
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_73626.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.95.9e-15108160456
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                   ++r+rr++kNRe+A rsR+RK+a+  e e + ++L  eN++L+++ + l + +
  MLOC_73626.1 108 DRRQRRMIKNRESAARSRARKQAYNNEMEAELAQLRRENRMLIQREQDLINVC 160
                   68*****************************************9988877666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-9105170IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.484107156IPR004827Basic-leucine zipper domain
PfamPF001702.8E-12108158IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-12108158No hitNo description
CDDcd147072.13E-22109156No hitNo description
SuperFamilySSF579592.56E-11109161No hitNo description
PROSITE patternPS000360112127IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MEELWKGMSL CSTPVALQPY HHLHSPAAAP YRGAGYHQDY LAGAVPQPPR TPPHHTALTL  60
EFTCLGGTGA ANSATSSGDD PAGCHFVFSA SGGGSRRATA VQPAVAGDRR QRRMIKNRES  120
AARSRARKQA YNNEMEAELA QLRRENRMLI QREQDLINVC TYTLTSCYTS FITWYTSFIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_73626.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3758363e-45AK375836.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3107H21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020185454.14e-82bZIP transcription factor 27-like
TrEMBLM0YW061e-133M0YW06_HORVV; Uncharacterized protein
STRINGMLOC_73626.11e-133(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.14e-18bZIP family protein