PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_74974.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family WRKY
Protein Properties Length: 1325aa    MW: 149044 Da    PI: 7.7633
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_74974.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.91.1e-0913021323223
                    --SS-EEEEEEE--TT-SS-EE CS
          WRKY    2 dDgynWrKYGqKevkgsefprs 23  
                    dDg++WrKYGqK++ gs++prs
  MLOC_74974.1 1302 DDGFSWRKYGQKDILGSRYPRS 1323
                    8********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147984.22E-9235356No hitNo description
SuperFamilySSF525404.13E-54387662IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.4E-15408555IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009311.2E-55408688IPR002182NB-ARC
PRINTSPR003643.3E-14427442No hitNo description
PRINTSPR003643.3E-14499513No hitNo description
PRINTSPR003643.3E-14596610No hitNo description
SuperFamilySSF520589.35E-227271094IPR032675Leucine-rich repeat domain, L domain-like
Gene3DG3DSA:3.80.10.104.5E-158191046IPR032675Leucine-rich repeat domain, L domain-like
PRINTSPR003643.3E-14951967No hitNo description
Gene3DG3DSA:2.20.25.802.3E-812881323IPR003657WRKY domain
SuperFamilySSF1182903.53E-712951323IPR003657WRKY domain
PROSITE profilePS5081110.80812961325IPR003657WRKY domain
SMARTSM007740.008813011325IPR003657WRKY domain
PfamPF031063.6E-613021323IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043531Molecular FunctionADP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1325 aa     Download sequence    Send to blast
MDAPYSPRGL QGPRPPRLKV RQESHAIKKP SGAPEQSQAQ GHGRLEQQRR QAVRIDANPS  60
FRELVQYLSG GVPASDSLVH QLVGQGSESQ TQDFQIVEAG EWQPSLPSEQ LLSAAISPAG  120
RLASTDRSLR PVPTRPPDVI DLTDDRFEDG GLAGIADDDW LSLKGALPSS PPPDSTSGQF  180
LPQGPKSVKQ LKQTVSDISH EVHSQVKQAC HTKKRTQQIQ APVCAMADAM FRLPEKLDAL  240
LASHGQTLPR GAEEEIPLIK QDLEKMVAIL QEHDDSGAED RAMTAKCLAK EVRELSYDME  300
DSVDQYEQTA TTSKWIAPRL KKQKFARRRV TRLPVKLRWR LWMANKIREF SLRSQEALQR  360
YSLFNHHGDN AIRAAAIGGT GTSTPPRHDA SFGSWYPTPY EELVGIGEHV NNLEAWLGRD  420
GEQRLKVVTV VGSGGIGKST LVKELYRRMK GQFECRAFVR TSRKPNIRRL LINMLSQVRP  480
HQTSHTWKLH SLIADIRTHL QDKRYLIVID DVWATQTWDI VNRALPDGNL YSGILITTEI  540
DDVALKCGGY DSKYVLPMKP LCHDDSRKLF FRTAFGPQYE CPPELSEVAN NIIRKCAGFP  600
LAVVTIAGLL VNQMGKPEQW DFVNKSLGHG LRTNPASEGM KQVLNLSYNN LRLHLKACLM  660
YLSIYEEDYM IQKNDLVKQW IAEGFIHATE EKDMVEISRI CFDDLISSRM IQPAHINDTG  720
DVLSCTVHHM VVDFITHKSL EENFVTAIDH CQTTARLADK VRRLSLHFGN AEVTPPTNMR  780
LLQVRTLAFF GVIKCLPSIV EFGLLRILIL HLWGDDESIS FDLTGISELF RLRYLHVTCN  840
ATLEVPQTQI RGLRYLETLK IDARVSAVPS DIVHLPGLLH LSLPVEAHLP NGIGCMTLLC  900
TLECFDISVN SVENVHSLGE LTNLRDLRLI CSTVHSCYLT SKMDGVCSIL TKLSNLRSLT  960
LEPSSILDVG PSSMIISCDG LSSVSSPPAC LQTFEWLPRI CTFSSLPKWI GHLSKLCILK  1020
IGVRKLTNND FDILRGLPAL TVLSLYIRTK PAKRILFNKI GFSVLKYFKF RCRAPSLEFE  1080
VDAMPNLLKL KLHFDAHRVD QHGAIPVGIV HLTGLKEISA KIGGVGVNDP DRRAAELALI  1140
DAIKMHPARP TFSIHCLDAM FSGEDDDIKK EDPIEHMTLQ KQYDVKKEDS IERMTLQKQC  1200
GIKKEDSTEH TTLQEQYDIK KEESTEHMTL QIQNDIKKEE STEHMTLQIQ NDIKKEDSNK  1260
QHGVLQKDYR DDGNKHAHGR RTLPKWSTQV RVSSLQDIEG HDDGFSWRKY GQKDILGSRY  1320
PRSAV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C5e-422267441504Disease resistance RPP13-like protein 4
6j5t_F5e-422267441504Disease resistance RPP13-like protein 4
6j5t_G5e-422267441504Disease resistance RPP13-like protein 4
6j5t_L5e-422267441504Disease resistance RPP13-like protein 4
6j5t_O5e-422267441504Disease resistance RPP13-like protein 4
6j5u_A5e-422267441504Disease resistance RPP13-like protein 4
6j5v_A5e-422267441504Disease resistance RPP13-like protein 4
6j5w_A5e-422267441504Disease resistance RPP13-like protein 4
6j6i_C5e-422267441504Disease resistance RPP13-like protein 4
6j6i_F5e-422267441504Disease resistance RPP13-like protein 4
6j6i_G5e-422267441504Disease resistance RPP13-like protein 4
6j6i_L5e-422267441504Disease resistance RPP13-like protein 4
6j6i_O5e-422267441504Disease resistance RPP13-like protein 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_74974.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020161815.10.0putative disease resistance RPP13-like protein 2 isoform X2
TrEMBLA0A287S3V40.0A0A287S3V4_HORVV; Uncharacterized protein
STRINGMLOC_74974.50.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.21e-13WRKY family protein