PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_75047.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 216aa    MW: 24269.8 Da    PI: 4.6317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_75047.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.9e-114285150
           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                  +g++GVr +  +gr++AeI +      +   +lg+f  +e Aa a++a +
  MLOC_75047.1 42 TGFRGVRLRD-SGRYAAEITVD-----HSPMWLGTFPMPELAAHAYDAVA 85
                  69*******9.7*********3.....4*******************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.29E-1342100No hitNo description
SMARTSM003801.1E-843104IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-134398IPR016177DNA-binding domain
PROSITE profilePS5103215.6854398IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-164499IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MWSRCNSEGR RFGGYGRGYG ACDLLWPRRD GRSHALPVQS GTGFRGVRLR DSGRYAAEIT  60
VDHSPMWLGT FPMPELAAHA YDAVAWQYGR PRSEMNFSDV ETAEDATTMA PGFRMVCRAM  120
EEENREARRQ LRAAEADEEA MEKLRRENPD LVKTEGEFFA SRGEKKPKTE ANPFTVAGPS  180
APMINIEDSD ESGLSDSDSD EEFDVDWKTL TRESGL
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_75047.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGMLOC_75047.11e-158(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1681133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-09ethylene-responsive element binding factor 13