PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_75554.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family VOZ
Protein Properties Length: 657aa    MW: 73660.2 Da    PI: 7.4074
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_75554.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ421.81.1e-1293625791217
           VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 
                   p+p++fl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip+cegaat+kspwna+elf
  MLOC_75554.1 362 PAPASFLRPKCALWDCPRPAQGSERWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPVCEGAATTKSPWNAPELF 458
                   89*************************************9879****************************************************** PP

           VOZ  97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdek 193
                   dl ++ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqps+s+ewhlyeyein+ da+alyrle+k++d+k
  MLOC_75554.1 459 DLYIFEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSTSYEWHLYEYEINDRDAFALYRLEFKSSDAK 555
                   ************************************************************************************************* PP

           VOZ 194 ksakgkvskdsladlqkklgrlta 217
                   ksak+k ++++l ++q++++rl+a
  MLOC_75554.1 556 KSAKSKFTCSPLIEIQQQMVRLSA 579
                   **********************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    Send to blast
MTLFYRTTLS TLTTSRGFLP IYSVRRAHPP PPFCRGRRFS ASRPSKVAAI PSERASERER  60
EKEKDTKLYE HLSSRRAKRG RGRRTARPPS TPSLPPSAAP TDRSGTARAS AMRKGSSRSG  120
SARHQQFRAR AKTRVDDLQD MFSGLQYARK EARSTDAVLL EAQLHQMLRE WRAELSVPSP  180
ASSLQAGNDN RDQSDPPSET PRPPQLAAAE EEDDATSQLV EQLPRPSADQ ARRHPQGGDH  240
DMKPEPREEA IADPVTVAQQ PPSLGQGVMA TPATAVFHDQ MYYVNQELTV EDFLYDDDYK  300
INLPGSNPEI LNNLEGIGQQ EYPQFNLPQE LPPNAYLDMS NYGQNAGDVF LHMSDLLTTM  360
TPAPASFLRP KCALWDCPRP AQGSERWQDY CSMYHAELAV KEEGPPGTMP VIRPRGIDLK  420
DGPLFAALSA KIQGKHVGIP VCEGAATTKS PWNAPELFDL YIFEGESMRE WLFFDKPRRA  480
FDSGNRKQRS LPDYNGRGWH ESRKQVMKDF GGLKRSYYMD PQPSTSYEWH LYEYEINDRD  540
AFALYRLEFK SSDAKKSAKS KFTCSPLIEI QQQMVRLSAD GPLENKRAAR GRTKDASANI  600
YPVQNSTAHD NAPDAYQAAA QVDQMAFLNG SVVYGPHLPY GYPTEGGDFY WNSNDGA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_75554.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3631850.0AK363185.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013F10.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020201118.10.0transcription factor VOZ1-like
SwissprotQ9SGQ01e-148VOZ1_ARATH; Transcription factor VOZ1
TrEMBLM0Z1T60.0M0Z1T6_HORVV; Uncharacterized protein
STRINGMLOC_75554.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23433888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-144vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]