PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_7891.3
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family ERF
Protein Properties Length: 131aa    MW: 13730.9 Da    PI: 4.8895
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_7891.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.51.6e-08110129222
          AP2   2 gykGVrwdkkrgrWvAeIrdp 22 
                  +y+GVr+++ +g+W+AeIrdp
  MLOC_7891.3 110 RYRGVRQRP-WGKWAAEIRDP 129
                  7********.**********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.16E-5110130IPR016177DNA-binding domain
PROSITE profilePS5103211.878110131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-9110130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MAGRLPGGEQ DGEAAAGSVL SGEYQAQEMS TMVSALARVV SGGDDGWEDH PAMGGYVHAQ  60
GSYPAAPTPD QLAAGQERSP DVQQSAAMGE QYTPAEQASH GGGGGVPERR YRGVRQRPWG  120
KWAAEIRDPH K
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_7891.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3721505e-83AK372150.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2147E01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231329.25e-30ethylene-responsive transcription factor ERF110
TrEMBLA0A287G9J73e-86A0A287G9J7_HORVV; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-12ERF family protein