PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_8187.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family G2-like
Protein Properties Length: 211aa    MW: 23807.8 Da    PI: 6.7976
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_8187.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.61.6e-091203655
      G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                 m +kgLtl+h+kSHLQkYRl
  MLOC_8187.1  1 MAMKGLTLYHLKSHLQKYRL 20
                 899****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-8121IPR009057Homeodomain-like
PfamPF143798.7E-2063109IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MAMKGLTLYH LKSHLQKYRL GKHTKKSTDL ELDNSGEFTT QDINFQVGAP LVVPAGRDAA  60
REMPLEDTLR YQIQVQRELC EQLEVQKKLQ MRIEAQGRYL KEILEKAQEN ISFDANGSAG  120
LENARSQLTN FNLALPGLSD NGTHVYKESS EHSVKAVTDD NLHNNNLDFQ LYRVRSQEAK  180
NAKCTPKTED LLLLDLNIKG GYDLSSRGMQ G
Cis-element ? help Back to Top
SourceLink
PlantRegMapMLOC_8187.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3715120.0AK371512.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2136B23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020164352.11e-136myb family transcription factor PHL11-like
TrEMBLA0A287J7T61e-154A0A287J7T6_HORVV; Uncharacterized protein
STRINGMLOC_8187.21e-154(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.15e-33G2-like family protein