PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G067300.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 232aa    MW: 24769.8 Da    PI: 4.9795
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G067300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.8e-1673121255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           y+G+r  +++g+Wv+eIr p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  Manes.01G067300.1.p  73 LYRGIR--SRSGKWVSEIRQPRK---STRIWLGTYPTPEMAAAAYDVAALALKG 121
                          69***6..678*********843...5***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.6E-1072121IPR001471AP2/ERF domain
CDDcd000182.35E-1672129No hitNo description
SuperFamilySSF541715.04E-1873130IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-2673129IPR001471AP2/ERF domain
SMARTSM003802.7E-2873135IPR001471AP2/ERF domain
PROSITE profilePS5103220.36373129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MPSNLPQINQ TQPPLSSPFD PSSHPFQPLL LSRSIPTITC ESPSPKHPSQ PSSSNPTAMA  60
MATTSAAPKR HPLYRGIRSR SGKWVSEIRQ PRKSTRIWLG TYPTPEMAAA AYDVAALALK  120
GDDAVLNFPG SVGSYPVPLS SSSTDIRNAA AAAATFKKAE MNQALAQLPT NDDTLNANFT  180
SGEGFIDEEA LFDMPNLLMD MAEGMLLSPP RINSSDDSAG TPDGESLWSY Y*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-13711291272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G067300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021629575.11e-167ethylene-responsive transcription factor ERF027-like
SwissprotQ9CAN98e-51ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A2C9WKQ91e-167A0A2C9WKQ9_MANES; Uncharacterized protein
STRINGcassava4.1_026925m1e-167(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-45ERF family protein