PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.01G101000.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 403aa    MW: 45128.9 Da    PI: 4.2989
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.01G101000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-184291255
                  AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Manes.01G101000.1.p 42 RFVGVRQRP-SGRWVAEIKDtI----QKIRVRLGTFDTAEEAARAYDEAACLLRG 91
                         789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.70E-294198No hitNo description
PfamPF008479.7E-134291IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-184299IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.2E-254298IPR001471AP2/ERF domain
PROSITE profilePS5103218.2414299IPR001471AP2/ERF domain
SMARTSM003803.3E-3242105IPR001471AP2/ERF domain
PRINTSPR003679.1E-64354IPR001471AP2/ERF domain
PRINTSPR003679.1E-66581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MGRKRKGGGE AVEDKNSTEA TVAWDEMVKE GALGGVRRVR KRFVGVRQRP SGRWVAEIKD  60
TIQKIRVRLG TFDTAEEAAR AYDEAACLLR GANTRTNFWP CSSSSSTTPA LPSKITNLLL  120
QRLKASPPSV PPSLPINLQE LQEVEEYREE TADFSDTQFT DFLNDPEDYT TCSNDNINTT  180
SSSAVDYMER SLEPCLTEKE DNGGRELDFE YCNWHDIAES CSFNVNNSED EGEEDEEEDE  240
GEGIDMGALD FHFVDDVESS CYYSPFEIAE EIDEPVEPVT FGDECSMLRA AMKRMKYERK  300
FSASLYAFNG IPECIRLKLE SGNVKGRERS AQLTNLRDAC GKIKEKERKA KEENLEVMEK  360
KQENSQSSSI KMEASASSSS LSNDGELSLW NSLDLPPICF VN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.01G101000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1559582e-81EF155958.1 Populus trichocarpa WIN1-like protein (WIN1L) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021604345.10.0ethylene-responsive transcription factor RAP2-2-like
TrEMBLA0A2C9WJC60.0A0A2C9WJC6_MANES; Uncharacterized protein
STRINGcassava4.1_027506m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-14related to AP2 11